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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthetic_map1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 2
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Oryza
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthetic_map1 [ View Map Set Info ]
Map Name: 2
Map Start: 0 bp
Map Stop: 35,930,381 bp
Features by Type:
347 Marker Oryza
234 QTL
581 Total

Map Features

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Items 1 to 25 of 581.       of 24 | Next
Rice - Synthetic_map1 - 2
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
C17C2 Marker Oryza 30,068,665 - 30,069,006 No other positions
P0654B04 Marker Oryza 29,931,442 - 30,032,269 No other positions
RM138 Marker Oryza 35,673,904 - 35,675,419 No other positions
S11127 Marker Oryza 30,092,693 - 30,093,277 No other positions
EM18_13 Marker Oryza 29,545,893 - 29,548,342 No other positions
R857S Marker Oryza 26,084,656 - 26,084,910 No other positions
RZ220 Marker Oryza 744,663 - 745,178 No other positions
C9 Marker Oryza 18,915,432 - 18,915,807 No other positions
R208 Marker Oryza 35,080,219 - 35,080,639 No other positions
RM438 Marker Oryza 9,162,844 - 9,163,140 No other positions
C535 Marker Oryza 9,928,993 - 9,931,061 No other positions
R1424 Marker Oryza 22,816,206 - 22,816,728 No other positions
RM262 Marker Oryza 20,794,972 - 20,795,112 No other positions
S20660 Marker Oryza 15,886,360 - 15,889,073 No other positions
C12249S Marker Oryza 5,332,259 - 5,333,857 No other positions
G39 Marker Oryza 27,034,336 - 27,034,665 No other positions
RG365 Marker Oryza 2,732,581 - 2,733,044 No other positions
RZ61 Marker Oryza 23,543,972 - 23,544,639 No other positions
E1107S Marker Oryza 15,476,868 - 15,477,249 No other positions
R2975 Marker Oryza 16,531,457 - 16,531,778 No other positions
RM550 Marker Oryza 12,464,299 - 12,464,559 No other positions
C1769 Marker Oryza 26,516,974 - 26,517,385 No other positions
OSR17 Marker Oryza 827,133 - 827,369 No other positions
RM110 Marker Oryza 1,326,947 - 1,327,099 No other positions
S10927S Marker Oryza 7,761,709 - 7,762,384 No other positions